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Quantum-Si Incorporated (QSI)
:QSI
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Quantum-Si (QSI) AI Stock Analysis

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QSI

Quantum-Si

(NASDAQ:QSI)

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Neutral 49 (OpenAI - 4o)
Rating:49Neutral
Price Target:
$1.50
▼(-18.48% Downside)
Quantum-Si's overall stock score reflects significant financial and technical challenges. The most impactful factors are the company's ongoing struggles with profitability and bearish technical indicators. While the earnings call provided some positive insights into innovation and strategic placements, these are overshadowed by the broader financial difficulties and negative valuation metrics. Strategic improvements in profitability and cash management are essential for enhancing the stock's attractiveness.
Positive Factors
Innovation Roadmap Progress
Advancements in product development enhance Quantum-Si's competitive position in proteomics, potentially driving future revenue growth.
Strong Cash Position
A robust cash position provides financial stability and flexibility to invest in R&D and strategic initiatives, supporting long-term growth.
Doubling of Pharma and Biotech Opportunities
Expanding opportunities in key sectors can lead to increased partnerships and revenue streams, strengthening market presence.
Negative Factors
Profitability Challenges
Ongoing profitability issues can hinder reinvestment in growth initiatives and affect long-term financial health.
Increased Operating Expenses
Rising expenses may pressure margins and cash flow, limiting the company's ability to invest in strategic growth areas.
Uncertainty in NIH Funding Impact
Dependence on external funding creates revenue volatility, impacting financial planning and stability in the academic market.

Quantum-Si (QSI) vs. SPDR S&P 500 ETF (SPY)

Quantum-Si Business Overview & Revenue Model

Company DescriptionQuantum-Si (QSI) is a biotechnology company focused on advancing the field of proteomics through its proprietary next-generation protein sequencing technology. Operating primarily in the life sciences sector, Quantum-Si aims to unlock the potential of proteins to drive discoveries in drug development, diagnostics, and personalized medicine. The company's core product offerings include its protein sequencing platform and related software solutions, which enable researchers and clinicians to analyze protein structures and functions with unprecedented accuracy and speed.
How the Company Makes MoneyQuantum-Si generates revenue through multiple streams including the sale of its protein sequencing systems and reagents, as well as software licenses for its analytical tools. The company targets academic and commercial research institutions, pharmaceutical companies, and biotechnology firms that require advanced proteomic analysis capabilities. Significant partnerships with academic institutions and research organizations help to enhance its product development and validate its technology, potentially leading to further revenue opportunities. Additionally, QSI may explore collaborations for joint research projects or co-development agreements that can contribute to its earnings.

Quantum-Si Key Performance Indicators (KPIs)

Any
Any
Revenue by Segment
Revenue by Segment
Chart Insights
Data provided by:Main Street Data

Quantum-Si Earnings Call Summary

Earnings Call Date:Nov 05, 2025
(Q3-2025)
|
% Change Since: |
Next Earnings Date:Mar 09, 2026
Earnings Call Sentiment Neutral
The call highlighted significant advancements in product development and strategic placements in academic institutions, despite financial challenges due to market conditions and a costly lease termination. The focus on innovation and cost management was balanced against the impact of external funding uncertainties.
Q3-2025 Updates
Positive Updates
Successful Sequencing on Proteus Prototype
Quantum-Si announced successful sequencing runs on a prototype Proteus system, marking a critical milestone in their development program for 2025.
Academic Placements and Initial Reagent Purchases
The company implemented its platform in 12 new customer labs, with more than half being academic, overcoming NIH funding challenges in 2025.
Launch of Version 4 Sequencing Kit
The new kit includes improved amino acid detection and increased multiplexing capability, enhancing overall system performance.
Cost Control and Decreased Operating Expenses
Adjusted operating expenses decreased year-over-year, demonstrating effective cost management while funding innovation.
Negative Updates
Revenue Impacted by Capital Market Headwinds
Revenue for Q3 2025 was $552,000, affected by capital sales headwinds and uncertainty in NIH funding.
Financial Loss Due to Lease Termination
A $13.6 million expense related to the termination of a lease facility in New Haven, Connecticut, was reported.
Long Sales Cycle in Biotech and Pharma
The sales cycle in biotech and pharma segments is around 9 to 12 months, indicating slower-than-desired sales processes.
Company Guidance
During the Quantum-Si third quarter earnings call, the company provided several key metrics and updates for the period ending September 30, 2025. Revenue for the quarter was reported at $552,000, with a gross profit of $194,000 and a gross margin of 35%. The company has implemented a placement program to facilitate access to its instruments, resulting in 12 new customer implementations, primarily in academic labs. Quantum-Si also shared progress on their innovation road map, announcing successful sequencing runs on a prototype Proteus system, a key milestone for 2025. Additionally, they have launched a version 4 sequencing kit and are on track to introduce a version 3 library preparation kit by the end of the year, which will significantly lower sample input requirements. Financially, the company reported GAAP total operating expenses of $40 million for the quarter, with adjusted operating expenses of $21.4 million. For the nine months ended September 30, 2025, revenue was $2.0 million, and gross profit was $1.0 million, with a gross margin of 52%. The company also highlighted a strong cash position of $230.5 million and adjusted its guidance for 2025, expecting adjusted operating expenses to be $96 million or less and total cash use to be $103 million or less.

Quantum-Si Financial Statement Overview

Summary
Quantum-Si faces significant financial challenges, particularly in terms of profitability and cash flow. The income statement reveals negative net profit margins and declining revenue growth. The balance sheet shows low leverage but negative return on equity, and the cash flow statement highlights negative operating and free cash flow. Despite a stable financial structure, profitability and cash management need strategic improvements.
Income Statement
45
Neutral
Quantum-Si's income statement reveals significant challenges, with negative net profit margins and declining revenue growth. The TTM data shows a gross profit margin of 53.17%, indicating some efficiency in managing production costs. However, the company struggles with profitability, as evidenced by a net profit margin of -31.20% and an EBIT margin of -32.43%. The revenue growth rate is negative, at -6.89%, suggesting declining sales. Overall, the company faces profitability issues that need addressing.
Balance Sheet
60
Neutral
The balance sheet shows a relatively low debt-to-equity ratio of 0.05, indicating conservative leverage. However, the return on equity is negative at -47.64%, reflecting the company's inability to generate profit from shareholders' equity. The equity ratio is strong, with stockholders' equity making up a significant portion of total assets. While the company maintains a stable financial structure, profitability remains a concern.
Cash Flow
50
Neutral
The cash flow statement highlights a challenging cash position, with negative operating cash flow and free cash flow. Despite this, the free cash flow to net income ratio is positive at 1.04, indicating that the company is generating some cash relative to its net losses. The free cash flow growth rate is positive at 9.18%, showing some improvement. However, the operating cash flow to net income ratio is negative, suggesting operational inefficiencies.
BreakdownTTMDec 2024Dec 2023Dec 2022Dec 2021Dec 2020
Income Statement
Total Revenue3.18M3.06M1.08M0.000.000.00
Gross Profit1.64M1.60M488.00K0.000.000.00
EBITDA-113.96M-103.98M-91.80M-111.77M-93.94M-35.80M
Net Income-116.85M-101.01M-95.96M-132.44M-94.99M-36.61M
Balance Sheet
Total Assets260.13M247.87M298.25M391.49M503.23M40.59M
Cash, Cash Equivalents and Short-Term Investments225.84M209.60M257.74M351.31M471.30M36.91M
Total Debt4.61M12.95M15.30M17.45M8.08M1.75M
Total Liabilities24.97M32.45M26.63M32.78M26.19M4.50M
Stockholders Equity235.16M215.42M271.62M358.71M477.03M36.09M
Cash Flow
Free Cash Flow-105.22M-92.38M-99.31M-101.30M-72.58M-33.03M
Operating Cash Flow-101.25M-87.80M-94.04M-90.56M-66.81M-32.57M
Investing Cash Flow-41.27M-32.67M143.43M137.19M-450.94M-461.00K
Financing Cash Flow131.16M35.88M149.00K1.91M516.63M37.01M

Quantum-Si Technical Analysis

Technical Analysis Sentiment
Negative
Last Price1.84
Price Trends
50DMA
1.76
Negative
100DMA
1.59
Negative
200DMA
1.55
Negative
Market Momentum
MACD
-0.18
Positive
RSI
32.21
Neutral
STOCH
9.72
Positive
Evaluating momentum and price trends is crucial in stock analysis to make informed investment decisions. For QSI, the sentiment is Negative. The current price of 1.84 is above the 20-day moving average (MA) of 1.68, above the 50-day MA of 1.76, and above the 200-day MA of 1.55, indicating a bearish trend. The MACD of -0.18 indicates Positive momentum. The RSI at 32.21 is Neutral, neither overbought nor oversold. The STOCH value of 9.72 is Positive, not indicating any strong overbought or oversold conditions. Overall, these indicators collectively point to a Negative sentiment for QSI.

Quantum-Si Risk Analysis

Quantum-Si disclosed 67 risk factors in its most recent earnings report. Quantum-Si reported the most risks in the "Finance & Corporate" category.
Finance & Corporate - Financial and accounting risks. Risks related to the execution of corporate activity and strategy
Latest Risks Added 0 New Risks

Quantum-Si Peers Comparison

Overall Rating
UnderperformOutperform
Sector (51)
Financial Indicators
Name
Overall Rating
Market Cap
P/E Ratio
ROE
Dividend Yield
Revenue Growth
EPS Growth
54
Neutral
$122.17M-1.58-25.74%13.77%-4.76%
51
Neutral
$7.86B-0.30-43.30%2.27%22.53%-2.21%
49
Neutral
$339.40M-52.44%40.20%-4.07%
49
Neutral
$199.55M-2.85-3.91%37.89%
47
Neutral
$355.36M-5.58-29.83%-40.26%
36
Underperform
$224.91M-1.44-96.44%46.68%
34
Underperform
$828.44M-32.00%45.66%
* Healthcare Sector Average
Performance Comparison
Ticker
Company Name
Price
Change
% Change
QSI
Quantum-Si
1.27
-0.10
-7.30%
FHTX
Foghorn Therapeutics
4.62
-3.28
-41.52%
SEER
Seer
1.97
-0.41
-17.23%
DSGN
Design Therapeutics
8.35
2.73
48.58%
ERAS
Erasca
2.92
0.16
5.80%
TNYA
Tenaya Therapeutics
1.23
-1.73
-58.45%

Quantum-Si Corporate Events

Quantum-Si’s Earnings Call: Innovation Amid Challenges
Nov 7, 2025

Quantum-Si’s Earnings Call Highlights Innovation Amid Financial Challenges

Quantum-Si Reports Q3 2025 Financial Results
Nov 6, 2025

Quantum-Si Incorporated is a proteomics technology company that specializes in redefining protein analysis through single-molecule detection, aiming to make protein analysis simpler and more informative. In its third quarter 2025 earnings report, Quantum-Si announced a revenue of $552,000 and highlighted successful sequencing on a prototype Proteus system, with its development program remaining on track. The company also emphasized the success of its instrument placement program and the launch of its version 4 Sequencing Kit.

Private Placements and FinancingRegulatory Filings and Compliance
Quantum-Si Enters Sales Agreement with Leerink Partners
Neutral
Sep 29, 2025

On September 26, 2025, Quantum-Si Incorporated entered into a Sales Agreement with Leerink Partners LLC to potentially offer and sell up to $100 million of its Class A common stock. The agreement allows for sales at the company’s discretion and is contingent upon the effectiveness of a shelf registration statement filed with the SEC. The arrangement provides flexibility in stock sales, with Leerink Partners acting as sales agent, and includes provisions for commissions and legal expense reimbursements. This strategic move could impact Quantum-Si’s market presence and financial strategy, although the company is not obligated to sell any shares.

The most recent analyst rating on (QSI) stock is a Hold with a $1.50 price target. To see the full list of analyst forecasts on Quantum-Si stock, see the QSI Stock Forecast page.

Business Operations and Strategy
Quantum-Si Terminates Lease Agreement with Winchester Office
Negative
Sep 26, 2025

Quantum-Si Incorporated and Winchester Office LLC have agreed to terminate their lease agreement for premises in New Haven, CT, originally set to expire in 2032. As part of the settlement, Quantum-Si will pay a termination fee of $11 million, adjusted for credits, and will have no further rent obligations after September 23, 2025.

The most recent analyst rating on (QSI) stock is a Hold with a $1.50 price target. To see the full list of analyst forecasts on Quantum-Si stock, see the QSI Stock Forecast page.

Glossary
BuyA stock rated as a "Buy" is expected to perform better than the overall market or a specific benchmark over the near-to-medium term. This rating suggests the stock is likely to deliver higher returns compared to other stocks in the same sector or market index. Note: This is not investment advice; please consult a financial advisor before making investment decisions.
HoldA stock rated as a "Hold" is expected to perform in line with the overall market or a specific benchmark. This rating indicates that the stock is neither particularly compelling nor unfavorable for investment. Note: This is not investment advice; please consult a financial advisor before making investment decisions.
SellA stock rated as a "Sell" is expected to perform worse than the overall market or a specific benchmark over the near-to-medium term. This rating suggests the stock may deliver lower returns compared to other stocks in the same sector or market index. Note: This is not investment advice; please consult a financial advisor before making investment decisions.

Disclaimer

This AI Analyst Stock Report is automatically generated by our AI systems using advanced algorithms and publicly available financial, technical, and market data. While the information provided aims to be accurate and insightful, it is intended for informational purposes only and should not be considered financial advice. Any content created by an AI (Artificial Intelligence) system may contain inaccuracies and/or contain errors. Investing in stocks carries inherent risks, and past performance is not indicative of future results. This report does not account for your personal financial circumstances, objectives, or risk tolerance. Always conduct your own research or consult with a qualified financial advisor before making investment decisions. The analysis and recommendations provided are based on historical and current data and may not fully reflect future market conditions or unexpected developments. Neither the creators of this report nor its affiliated entities guarantee the accuracy, completeness, or reliability of the information presented. Use this report at your own discretion and risk.Date of analysis: Nov 14, 2025