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Quantum-Si (QSI)
NASDAQ:QSI
US Market

Quantum-Si (QSI) AI Stock Analysis

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QSI

Quantum-Si

(NASDAQ:QSI)

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Neutral 50 (OpenAI - 5.2)
Rating:50Neutral
Price Target:
$1.00
▼(-16.67% Downside)
The score is held back primarily by weak financial performance (ongoing losses, negative margins, and declining revenue) and a clearly bearish technical setup (price below key moving averages with negative MACD). Offsetting this, the latest earnings call showed meaningful product-development milestones, cost control, and a strong cash position, but valuation metrics are not supportive given losses and no dividend data.
Positive Factors
Cash runway / balance sheet strength
A cash runway into Q2 2028 provides durable funding to complete Proteus R&D and early commercialization without immediate dilution. This multi-year liquidity supports hiring, manufacturing scale-up, and go-to-market activities, reducing execution risk over the next 2–3 years.
Proteus development milestone
Demonstrated sequencing on the Proteus prototype materially lowers technical risk for the next-generation platform. Achieving this milestone enhances credibility with customers and partners, accelerates regulatory and commercialization timelines, and strengthens long-term product leadership in protein sequencing.
Recurring consumables and kit launches
New sequencing and library kits deepen the razor/razorblade revenue model by increasing consumable relevance per installed instrument. Improved kits that lower sample input and boost multiplexing enhance user value and adoption retention, supporting durable, higher-margin recurring revenue over time.
Negative Factors
Persistent losses and declining revenue
Sustained negative margins and shrinking revenue undermine the company’s ability to self-fund operations and commercial expansion. Continued losses increase dependence on external capital, which can dilute shareholders and constrain long-term investment in manufacturing, sales, and clinical validation.
Long sales cycle in target markets
A 9–12 month sales cycle reduces revenue visibility and slows installed-base growth critical for consumable repeat purchases. Extended purchasing timelines increase working capital needs and delay scalable commercial returns, challenging sustainable growth and slowing network effects from broader adoption.
Low current commercial traction
Very low recent instrument and overall revenue indicate early-stage commercial traction, meaning consumable repeatability and service revenue remain limited. Scaling to a self-sustaining commercial model will require meaningful instrument adoption, which is resource intensive and uncertain in the near term.

Quantum-Si (QSI) vs. SPDR S&P 500 ETF (SPY)

Quantum-Si Business Overview & Revenue Model

Company DescriptionQuantum-Si incorporated, a life sciences company, develops a single molecule detection platform for sample preparation and sequencing. It offers a proprietary single molecule detection platform for use in semiconductor industry to field proteomics to enable next generation protein sequencing. The company was incorporated in 2013 is based in Guilford, Connecticut.
How the Company Makes MoneyQuantum-Si generates revenue through multiple streams including the sale of its protein sequencing systems and reagents, as well as software licenses for its analytical tools. The company targets academic and commercial research institutions, pharmaceutical companies, and biotechnology firms that require advanced proteomic analysis capabilities. Significant partnerships with academic institutions and research organizations help to enhance its product development and validate its technology, potentially leading to further revenue opportunities. Additionally, QSI may explore collaborations for joint research projects or co-development agreements that can contribute to its earnings.

Quantum-Si Key Performance Indicators (KPIs)

Any
Any
Revenue by Segment
Revenue by Segment
Details revenue contributions from each business unit, highlighting which areas are most lucrative and where growth or decline is occurring.
Chart InsightsQuantum-Si's product revenue surged significantly through 2024, driven by strategic expansion in pharma and biotech opportunities, but faced a downturn in 2025 due to NIH funding uncertainties impacting U.S. academic lab purchases. Despite this, the company is innovating with new acquisition models and a robust innovation pipeline, including upcoming product launches. Service revenue has been more volatile, yet shows a general upward trend, reflecting efforts to capture more consumable revenue. The company's strong cash position and strategic initiatives suggest resilience amidst current challenges.
Data provided by:The Fly

Quantum-Si Earnings Call Summary

Earnings Call Date:Nov 05, 2025
(Q3-2025)
|
% Change Since: |
Next Earnings Date:Mar 09, 2026
Earnings Call Sentiment Neutral
The call highlighted significant advancements in product development and strategic placements in academic institutions, despite financial challenges due to market conditions and a costly lease termination. The focus on innovation and cost management was balanced against the impact of external funding uncertainties.
Q3-2025 Updates
Positive Updates
Successful Sequencing on Proteus Prototype
Quantum-Si announced successful sequencing runs on a prototype Proteus system, marking a critical milestone in their development program for 2025.
Academic Placements and Initial Reagent Purchases
The company implemented its platform in 12 new customer labs, with more than half being academic, overcoming NIH funding challenges in 2025.
Launch of Version 4 Sequencing Kit
The new kit includes improved amino acid detection and increased multiplexing capability, enhancing overall system performance.
Cost Control and Decreased Operating Expenses
Adjusted operating expenses decreased year-over-year, demonstrating effective cost management while funding innovation.
Negative Updates
Revenue Impacted by Capital Market Headwinds
Revenue for Q3 2025 was $552,000, affected by capital sales headwinds and uncertainty in NIH funding.
Financial Loss Due to Lease Termination
A $13.6 million expense related to the termination of a lease facility in New Haven, Connecticut, was reported.
Long Sales Cycle in Biotech and Pharma
The sales cycle in biotech and pharma segments is around 9 to 12 months, indicating slower-than-desired sales processes.
Company Guidance
During the Quantum-Si third quarter earnings call, the company provided several key metrics and updates for the period ending September 30, 2025. Revenue for the quarter was reported at $552,000, with a gross profit of $194,000 and a gross margin of 35%. The company has implemented a placement program to facilitate access to its instruments, resulting in 12 new customer implementations, primarily in academic labs. Quantum-Si also shared progress on their innovation road map, announcing successful sequencing runs on a prototype Proteus system, a key milestone for 2025. Additionally, they have launched a version 4 sequencing kit and are on track to introduce a version 3 library preparation kit by the end of the year, which will significantly lower sample input requirements. Financially, the company reported GAAP total operating expenses of $40 million for the quarter, with adjusted operating expenses of $21.4 million. For the nine months ended September 30, 2025, revenue was $2.0 million, and gross profit was $1.0 million, with a gross margin of 52%. The company also highlighted a strong cash position of $230.5 million and adjusted its guidance for 2025, expecting adjusted operating expenses to be $96 million or less and total cash use to be $103 million or less.

Quantum-Si Financial Statement Overview

Summary
Mixed fundamentals: low leverage (debt-to-equity 0.05) and a strong equity base, but weak profitability (net margin -31.20%, EBIT margin -32.43%) and declining revenue growth (-6.89%). Cash flow remains negative despite some improvement in free cash flow growth (+9.18%).
Income Statement
45
Neutral
Quantum-Si's income statement reveals significant challenges, with negative net profit margins and declining revenue growth. The TTM data shows a gross profit margin of 53.17%, indicating some efficiency in managing production costs. However, the company struggles with profitability, as evidenced by a net profit margin of -31.20% and an EBIT margin of -32.43%. The revenue growth rate is negative, at -6.89%, suggesting declining sales. Overall, the company faces profitability issues that need addressing.
Balance Sheet
60
Neutral
The balance sheet shows a relatively low debt-to-equity ratio of 0.05, indicating conservative leverage. However, the return on equity is negative at -47.64%, reflecting the company's inability to generate profit from shareholders' equity. The equity ratio is strong, with stockholders' equity making up a significant portion of total assets. While the company maintains a stable financial structure, profitability remains a concern.
Cash Flow
50
Neutral
The cash flow statement highlights a challenging cash position, with negative operating cash flow and free cash flow. Despite this, the free cash flow to net income ratio is positive at 1.04, indicating that the company is generating some cash relative to its net losses. The free cash flow growth rate is positive at 9.18%, showing some improvement. However, the operating cash flow to net income ratio is negative, suggesting operational inefficiencies.
BreakdownTTMDec 2024Dec 2023Dec 2022Dec 2021Dec 2020
Income Statement
Total Revenue3.18M3.06M1.08M0.000.000.00
Gross Profit1.64M1.60M488.00K0.000.000.00
EBITDA-113.96M-103.98M-91.80M-111.77M-93.94M-35.80M
Net Income-116.85M-101.01M-95.96M-132.44M-94.99M-36.61M
Balance Sheet
Total Assets260.13M247.87M298.25M391.49M503.23M40.59M
Cash, Cash Equivalents and Short-Term Investments225.84M209.60M257.74M351.31M471.30M36.91M
Total Debt4.61M12.95M15.30M17.45M8.08M1.75M
Total Liabilities24.97M32.45M26.63M32.78M26.19M4.50M
Stockholders Equity235.16M215.42M271.62M358.71M477.03M36.09M
Cash Flow
Free Cash Flow-105.22M-92.38M-99.31M-101.30M-72.58M-33.03M
Operating Cash Flow-101.25M-87.80M-94.04M-90.56M-66.81M-32.57M
Investing Cash Flow-41.27M-32.67M143.43M137.19M-450.94M-461.00K
Financing Cash Flow131.16M35.88M149.00K1.91M516.63M37.01M

Quantum-Si Technical Analysis

Technical Analysis Sentiment
Negative
Last Price1.20
Price Trends
50DMA
1.27
Negative
100DMA
1.51
Negative
200DMA
1.51
Negative
Market Momentum
MACD
-0.03
Negative
RSI
42.66
Neutral
STOCH
32.98
Neutral
Evaluating momentum and price trends is crucial in stock analysis to make informed investment decisions. For QSI, the sentiment is Negative. The current price of 1.2 is below the 20-day moving average (MA) of 1.23, below the 50-day MA of 1.27, and below the 200-day MA of 1.51, indicating a bearish trend. The MACD of -0.03 indicates Negative momentum. The RSI at 42.66 is Neutral, neither overbought nor oversold. The STOCH value of 32.98 is Neutral, not indicating any strong overbought or oversold conditions. Overall, these indicators collectively point to a Negative sentiment for QSI.

Quantum-Si Risk Analysis

Quantum-Si disclosed 67 risk factors in its most recent earnings report. Quantum-Si reported the most risks in the "Finance & Corporate" category.
Finance & Corporate - Financial and accounting risks. Risks related to the execution of corporate activity and strategy
Latest Risks Added 0 New Risks

Quantum-Si Peers Comparison

Overall Rating
UnderperformOutperform
Sector (51)
Financial Indicators
Name
Overall Rating
Market Cap
P/E Ratio
ROE
Dividend Yield
Revenue Growth
EPS Growth
59
Neutral
$3.14B-22.88-32.00%45.66%
55
Neutral
$577.04M-8.90-29.83%-40.26%
54
Neutral
$104.32M-1.37-25.74%13.77%-4.76%
51
Neutral
$7.86B-0.30-43.30%2.27%22.53%-2.21%
50
Neutral
$258.59M-1.77-52.44%40.20%-4.07%
49
Neutral
$343.87M-4.86-3.91%37.89%
47
Neutral
$142.89M-1.00-96.44%46.68%
* Healthcare Sector Average
Performance Comparison
Ticker
Company Name
Price
Change
% Change
QSI
Quantum-Si
1.17
-0.79
-40.31%
FHTX
Foghorn Therapeutics
5.77
1.43
32.95%
SEER
Seer
1.86
-0.50
-21.19%
DSGN
Design Therapeutics
10.57
5.60
112.68%
ERAS
Erasca
10.31
8.43
448.40%
TNYA
Tenaya Therapeutics
0.79
-0.27
-25.47%

Quantum-Si Corporate Events

Business Operations and StrategyProduct-Related Announcements
Quantum-Si Updates Investor Presentation Highlighting Proteomics Strategy
Positive
Dec 29, 2025

On December 29, 2025, Quantum-Si posted an updated corporate presentation for investors on its website, outlining its strategy to capitalize on what it sees as a more than $75 billion and rapidly growing proteomics market. The materials highlight the company’s differentiated single-molecule protein sequencing technology, the growing user base and published data for its first-to-market Platinum Pro system, and plans to use Platinum Pro to build commercial infrastructure ahead of the planned Proteus platform launch, which is designed to deliver automated, high-value proteoform and post-translational modification analysis more broadly across laboratories. The presentation underscores Quantum-Si’s existing global distribution network, partnerships across commercialization, product development and manufacturing, a cash runway extending into the second quarter of 2028, and its view that scalable, affordable protein sequencing will be critical to meeting rising demand for complex, high-resolution proteomics across research and emerging clinical applications.

The most recent analyst rating on (QSI) stock is a Hold with a $1.50 price target. To see the full list of analyst forecasts on Quantum-Si stock, see the QSI Stock Forecast page.

Business Operations and StrategyProduct-Related Announcements
Quantum-Si Unveils Proteus Advancements at Investor Day
Positive
Nov 20, 2025

On November 19, 2025, Quantum-Si held its Investor & Analyst Day, presenting significant advancements in its Proteus program. The company highlighted the Proteus platform’s capabilities in deep protein analysis, automation, and affordability, which are expected to enhance proteomics research accessibility and efficiency. The Proteus platform, set for launch by the end of 2026, promises superior sequencing output and quality compared to existing technologies, positioning Quantum-Si as a leader in the proteomics field.

The most recent analyst rating on (QSI) stock is a Hold with a $1.50 price target. To see the full list of analyst forecasts on Quantum-Si stock, see the QSI Stock Forecast page.

Glossary
BuyA stock rated as a "Buy" is expected to perform better than the overall market or a specific benchmark over the near-to-medium term. This rating suggests the stock is likely to deliver higher returns compared to other stocks in the same sector or market index. Note: This is not investment advice; please consult a financial advisor before making investment decisions.
HoldA stock rated as a "Hold" is expected to perform in line with the overall market or a specific benchmark. This rating indicates that the stock is neither particularly compelling nor unfavorable for investment. Note: This is not investment advice; please consult a financial advisor before making investment decisions.
SellA stock rated as a "Sell" is expected to perform worse than the overall market or a specific benchmark over the near-to-medium term. This rating suggests the stock may deliver lower returns compared to other stocks in the same sector or market index. Note: This is not investment advice; please consult a financial advisor before making investment decisions.

Disclaimer

This AI Analyst Stock Report is automatically generated by our AI systems using advanced algorithms and publicly available financial, technical, and market data. While the information provided aims to be accurate and insightful, it is intended for informational purposes only and should not be considered financial advice. Any content created by an AI (Artificial Intelligence) system may contain inaccuracies and/or contain errors. Investing in stocks carries inherent risks, and past performance is not indicative of future results. This report does not account for your personal financial circumstances, objectives, or risk tolerance. Always conduct your own research or consult with a qualified financial advisor before making investment decisions. The analysis and recommendations provided are based on historical and current data and may not fully reflect future market conditions or unexpected developments. Neither the creators of this report nor its affiliated entities guarantee the accuracy, completeness, or reliability of the information presented. Use this report at your own discretion and risk.Date of analysis: Dec 31, 2025