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Bionano Genomics (BNGO)
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BioNano Genomics (BNGO) AI Stock Analysis

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BNGO

BioNano Genomics

(NASDAQ:BNGO)

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Underperform 40 (OpenAI - 4o)
Rating:40Underperform
Price Target:
$1.50
▼(-7.41% Downside)
BioNano Genomics' overall stock score is primarily impacted by its financial performance, which is hindered by significant profitability and cash flow issues. Technical analysis indicates a bearish trend, and valuation metrics are weak due to the lack of profitability. Despite positive earnings call highlights, the financial and technical challenges weigh heavily on the overall score.
Positive Factors
Revenue Growth
The 21% revenue growth in Q3 2025 indicates strong market demand and effective sales strategies, supporting long-term business expansion.
Gross Margin Improvement
Improved gross margins suggest better cost management and operational efficiency, enhancing profitability potential over time.
Expansion of Optical Genome Mapping (OGM)
The growth in OGM publications indicates increasing adoption and validation of the technology, strengthening the company's market position.
Negative Factors
Declining Revenue Growth
The declining revenue growth trend poses a risk to long-term financial stability, potentially limiting future investment and expansion.
Negative Profitability
Persistent negative profitability challenges the company's ability to sustain operations and invest in growth without external funding.
Cash Flow Challenges
Negative cash flow growth indicates inefficiencies in cash generation, potentially impacting the company's ability to fund operations and growth initiatives.

BioNano Genomics (BNGO) vs. SPDR S&P 500 ETF (SPY)

BioNano Genomics Business Overview & Revenue Model

Company DescriptionBioNano Genomics (BNGO) is a biotechnology company focused on advancing the field of genomics through its innovative solutions for genome mapping and analysis. Operating in the life sciences sector, BNGO specializes in providing tools and technologies that enable researchers and clinicians to better understand genetic variations and their implications in health and disease. The company's core products include the Saphyr system, a platform designed for high-throughput genome mapping, and related consumables and software that facilitate genomic analysis.
How the Company Makes MoneyBioNano Genomics generates revenue primarily through the sale of its Saphyr systems, consumables, and software solutions. The company has established a revenue model that includes the direct sale of its hardware and ongoing sales of consumables that are required for the operation of the Saphyr system. Additionally, BNGO benefits from software licensing and support services associated with their genomic analysis products. Significant partnerships with academic and research institutions, as well as collaborations with biopharmaceutical companies, contribute to its revenue by expanding the adoption of its technology in various research applications and clinical settings. The company may also receive funding through grants and strategic collaborations that support its product development and market expansion efforts.

BioNano Genomics Key Performance Indicators (KPIs)

Any
Any
Gross Profit by Segment
Gross Profit by Segment
Reveals the profitability of each segment, indicating where the company is most efficient and where costs might be impacting margins.
Chart InsightsBioNano Genomics' gross profit from the Product segment experienced a dramatic dip in Q3 2024, reflecting broader revenue challenges due to discontinued services. However, the subsequent recovery aligns with strategic cost reductions and improved gross margins. The Service and Other segment also faced volatility, with recent losses highlighting ongoing challenges. Despite these fluctuations, the company is optimistic, driven by strong flowcell sales, enhanced software and consumables revenue, and new CPT codes that may boost future reimbursement opportunities. Investors should watch for sustained improvements in these areas as potential growth drivers.
Data provided by:The Fly

BioNano Genomics Earnings Call Summary

Earnings Call Date:Nov 13, 2025
(Q3-2025)
|
% Change Since: |
Next Earnings Date:Mar 05, 2026
Earnings Call Sentiment Positive
The earnings call highlighted strong revenue growth, record flow cell sales, and improved gross margins, with significant reductions in operating expenses. However, challenges include limited new system installations and slow market evolution in Japan. Cash reserves are solid, but a portion is restricted.
Q3-2025 Updates
Positive Updates
Revenue Growth
Total revenue for Q3 2025 was $7.4 million, reflecting an increase of 21% compared to Q3 2024.
Flow Cells Sales Record
Sold an all-time record of 8,390 flow cells in Q3 2025, a 7% increase compared to the same period last year.
Gross Margin Improvement
Non-GAAP gross margin for Q3 2025 was 46%, up from 26% in Q3 2024.
Operating Expense Reduction
Non-GAAP operating expense for Q3 2025 was $9.7 million, a 40% reduction compared to $16.1 million in Q3 2024.
Cash Position Strengthened
Ended Q3 2025 with $31.8 million in cash, cash equivalents, and available-for-sale securities.
Expansion of Optical Genome Mapping (OGM)
97 new publications in Q3 2025 demonstrated the value of OGM, a 10% growth over the same period last year.
Negative Updates
Limited Installed Base Growth
Installed 7 new systems and brought 1 back for a net increase of 3, totaling 384 systems by the end of Q3 2025.
Cash Restrictions
Of the $31.8 million in cash, $10.3 million was subject to certain restrictions.
Japanese Market Slow to Ramp
Only 1 system installed in Japan, with the market evolving slower compared to other regions.
Company Guidance
In the third quarter of 2025, Bionano reported a total revenue of $7.4 million, marking a 21% increase compared to the same period in 2024. When adjusted for a prior $0.5 million write-down, core revenues grew 12% year-over-year. The company sold an all-time record of 8,390 flow cells, reflecting a 7% increase from the previous year, driven by increased utilization among routine users. Non-GAAP gross margin rose to 46%, up from 26% in Q3 2024, and operating expenses decreased by 40% to $9.7 million. The installed base expanded with seven new systems and a net increase of three, totaling 384 systems. The company ended the quarter with $31.8 million in cash and equivalents, following a $10 million public offering in September. Bionano reiterated its full-year revenue guidance of $26 million to $30 million and expects Q4 revenues between $7.5 million and $7.9 million.

BioNano Genomics Financial Statement Overview

Summary
BioNano Genomics faces significant profitability and cash flow challenges despite some revenue growth. The company struggles with negative margins and cash flow ratios, indicating ongoing financial difficulties. Improvements in leverage management are noted, but overall financial stability remains a concern.
Income Statement
35
Negative
BioNano Genomics shows a modest revenue growth rate of 4.72% TTM, but profitability remains a significant concern with a net profit margin of -271.02% and negative EBIT and EBITDA margins. The gross profit margin is low at 5.05%, indicating challenges in cost management. Overall, the company struggles with profitability despite some revenue growth.
Balance Sheet
40
Negative
The company's debt-to-equity ratio has improved to 0.43 TTM, reflecting better leverage management compared to previous years. However, the return on equity remains negative at -167.22%, indicating ongoing profitability issues. The equity ratio is not provided, but the balance sheet shows a need for improved financial stability.
Cash Flow
30
Negative
Free cash flow growth is negative at -28.35% TTM, and the operating cash flow to net income ratio is -1.08, highlighting cash flow challenges. The free cash flow to net income ratio is 1.0, indicating that free cash flow aligns with net income, but both are negative, reflecting cash flow difficulties.
BreakdownTTMDec 2024Dec 2023Dec 2022Dec 2021Dec 2020
Income Statement
Total Revenue28.72M30.78M36.12M27.80M17.98M8.50M
Gross Profit13.36M380.00K9.57M5.95M3.87M2.77M
EBITDA-28.58M-97.47M-213.60M-120.31M-73.86M-35.57M
Net Income-38.59M-112.02M-232.49M-132.60M-72.44M-41.11M
Balance Sheet
Total Assets79.06M76.67M214.40M307.50M377.10M60.45M
Cash, Cash Equivalents and Short-Term Investments3.06M9.47M66.77M113.19M250.61M38.45M
Total Debt7.37M27.30M79.41M11.67M10.70M16.32M
Total Liabilities29.26M41.30M118.25M58.10M39.98M25.37M
Stockholders Equity49.80M35.38M96.16M249.40M337.12M35.08M
Cash Flow
Free Cash Flow-18.67M-69.03M-126.87M-128.12M-73.39M-38.31M
Operating Cash Flow-18.67M-68.92M-125.18M-124.82M-71.93M-38.31M
Investing Cash Flow-13.76M73.84M24.16M82.77M-278.06M-2.45M
Financing Cash Flow26.33M-13.69M113.81M23.01M336.11M61.90M

BioNano Genomics Technical Analysis

Technical Analysis Sentiment
Negative
Last Price1.62
Price Trends
50DMA
1.78
Negative
100DMA
2.57
Negative
200DMA
3.18
Negative
Market Momentum
MACD
-0.04
Negative
RSI
48.81
Neutral
STOCH
83.52
Negative
Evaluating momentum and price trends is crucial in stock analysis to make informed investment decisions. For BNGO, the sentiment is Negative. The current price of 1.62 is below the 20-day moving average (MA) of 1.63, below the 50-day MA of 1.78, and below the 200-day MA of 3.18, indicating a neutral trend. The MACD of -0.04 indicates Negative momentum. The RSI at 48.81 is Neutral, neither overbought nor oversold. The STOCH value of 83.52 is Negative, not indicating any strong overbought or oversold conditions. Overall, these indicators collectively point to a Negative sentiment for BNGO.

BioNano Genomics Risk Analysis

BioNano Genomics disclosed 82 risk factors in its most recent earnings report. BioNano Genomics reported the most risks in the "Finance & Corporate" category.
Finance & Corporate - Financial and accounting risks. Risks related to the execution of corporate activity and strategy
Latest Risks Added 0 New Risks

BioNano Genomics Peers Comparison

Overall Rating
UnderperformOutperform
Sector (51)
Financial Indicators
Name
Overall Rating
Market Cap
P/E Ratio
ROE
Dividend Yield
Revenue Growth
EPS Growth
60
Neutral
$881.62M-3.80%13.60%74.64%
57
Neutral
$952.87M-43.69%-21.02%47.74%
54
Neutral
$121.79M-6.04-19.87%5.44%72.17%
51
Neutral
$7.86B-0.30-43.30%2.27%22.53%-2.21%
49
Neutral
$658.09M-72.52%0.21%-233.51%
46
Neutral
$60.46M-1.42-302.55%22.29%31.93%
40
Underperform
$18.83M-78.22%-13.84%88.80%
* Healthcare Sector Average
Performance Comparison
Ticker
Company Name
Price
Change
% Change
BNGO
BioNano Genomics
1.72
-12.50
-87.90%
MYGN
Myriad Genetics
7.06
-9.17
-56.50%
FLGT
Fulgent Genetics
28.52
8.97
45.88%
PSNL
Personalis
9.68
5.79
148.84%
BNR
Burning Rock Biotech
18.99
12.89
211.31%
BDSX
Biodesix
7.79
-19.41
-71.36%

BioNano Genomics Corporate Events

Bionano Genomics Reports Strong Q3 2025 Results
Nov 14, 2025

Bionano Genomics, Inc., a company specializing in genome analysis solutions, focuses on optical genome mapping (OGM) to assist researchers and clinicians in addressing complex genetic questions. In its latest earnings report, Bionano Genomics highlighted a strategic shift towards enhancing consumables and software utilization, which has contributed to a 21% increase in total revenue for the third quarter of 2025 compared to the same period in 2024. The company also reported a significant improvement in gross margins and a reduction in operating expenses.

Business Operations and StrategyPrivate Placements and Financing
BioNano Genomics Completes $9 Million Public Offering
Neutral
Sep 18, 2025

On September 16, 2025, Bionano Genomics, Inc. announced a public offering of 5,000,000 shares of common stock and warrants, raising approximately $9 million in net proceeds, which will be used for working capital and general corporate purposes. The offering closed on September 17, 2025, with H.C. Wainwright & Co. acting as the exclusive placement agent, and the company agreed to certain restrictions on issuing additional shares for a specified period, impacting its financial strategy and market operations.

The most recent analyst rating on (BNGO) stock is a Hold with a $1.50 price target. To see the full list of analyst forecasts on BioNano Genomics stock, see the BNGO Stock Forecast page.

Bionano Genomics’ Earnings Call: Cautious Optimism Amid Challenges
Sep 1, 2025

The recent earnings call for Bionano Genomics painted a picture of cautious optimism. While the company celebrated strong growth in flowcell sales and improved gross margins, it also faced challenges such as a decline in total revenue and a net decrease in the installed base of systems. Despite these hurdles, strategic advancements in software and consumables growth, along with new CPT codes, provide a hopeful outlook for future reimbursement opportunities.

Bionano Genomics Reports Q2 2025 Financial Results
Aug 15, 2025

Bionano Genomics is a company specializing in genome analysis solutions, offering optical genome mapping (OGM) systems, diagnostic services, and software for research and clinical applications. The company is recognized for its innovative approach to genome analysis and its platform-agnostic software solutions.

Glossary
BuyA stock rated as a "Buy" is expected to perform better than the overall market or a specific benchmark over the near-to-medium term. This rating suggests the stock is likely to deliver higher returns compared to other stocks in the same sector or market index. Note: This is not investment advice; please consult a financial advisor before making investment decisions.
HoldA stock rated as a "Hold" is expected to perform in line with the overall market or a specific benchmark. This rating indicates that the stock is neither particularly compelling nor unfavorable for investment. Note: This is not investment advice; please consult a financial advisor before making investment decisions.
SellA stock rated as a "Sell" is expected to perform worse than the overall market or a specific benchmark over the near-to-medium term. This rating suggests the stock may deliver lower returns compared to other stocks in the same sector or market index. Note: This is not investment advice; please consult a financial advisor before making investment decisions.

Disclaimer

This AI Analyst Stock Report is automatically generated by our AI systems using advanced algorithms and publicly available financial, technical, and market data. While the information provided aims to be accurate and insightful, it is intended for informational purposes only and should not be considered financial advice. Any content created by an AI (Artificial Intelligence) system may contain inaccuracies and/or contain errors. Investing in stocks carries inherent risks, and past performance is not indicative of future results. This report does not account for your personal financial circumstances, objectives, or risk tolerance. Always conduct your own research or consult with a qualified financial advisor before making investment decisions. The analysis and recommendations provided are based on historical and current data and may not fully reflect future market conditions or unexpected developments. Neither the creators of this report nor its affiliated entities guarantee the accuracy, completeness, or reliability of the information presented. Use this report at your own discretion and risk.Date of analysis: Nov 25, 2025